Mathias Wilhelm

基本信息

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职业迁徙

个人简介

We investigate how mass spectrometric data can be better understood, made usable for the broad scientific community and how findings from it can be translated into research and clinical practice.

研究兴趣

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PTMNavigator: Interactive Visualization of Differentially Regulated Post-Translational Modifications in Cellular Signaling Pathways

Julian Mueller,Florian P. Bayer,Mathias Wilhelm,Maximilian G. Schuh,Bernhard Kuster,Matthew The

NATURE COMMUNICATIONSno. 1 (2025)

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Deep Learning Enhances Precision of Citrullination Identification in Human and Plant Tissue Proteomes

Wassim Gabriel, Rebecca Meelker Gonzalez, Sophia Laposchan, Erik Riedel, Gönül Dündar,Brigitte Poppenberger,Mathias Wilhelm,Chien-Yun Lee

Molecular & cellular proteomics MCPpp.100924-100924, (2025)

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Author Correction: Π-Hub: the Proteomic Navigator of the Human Body

Fuchu He,Ruedi Aebersold,Mark S Baker,Xiuwu Bian,Xiaochen Bo, Daniel W Chan,Cheng Chang,Luonan Chen,Xiangmei Chen,Yu-Ju Chen,Heping Cheng,Ben C Collins, Fernando Corrales, Jürgen Cox, Weinan E,Jennifer E Van Eyk,Jia Fan,Pouya Faridi,Daniel Figeys, George Fu Gao, Wen Gao,Zu-Hua Gao,Keisuke Goda,Wilson Wen Bin Goh,Dongfeng Gu,Changjiang Guo,Tiannan Guo, Yuezhong He, Albert J R Heck,Henning Hermjakob,Tony Hunter, Narayanan Gopalakrishna Iyer,Ying Jiang, Connie R Jimenez, Lokesh Joshi, Neil L Kelleher,Ming Li,Yang Li,Qingsong Lin,Cui Hua Liu,Fan Liu,Guang-Hui Liu,Yansheng Liu,Zhihua Liu,Teck Yew Low,Ben Lu,Matthias Mann,Anming Meng, Robert L Moritz,Edouard Nice,Guang Ning,Gilbert S Omenn,Christopher M Overall,Giuseppe Palmisano,Yaojin Peng, Charles Pineau, Terence Chuen Wai Poon, Anthony W Purcell,Jie Qiao,Roger R Reddel,Phillip J Robinson,Paola Roncada,Chris Sander,Jiahao Sha,Erwei Song,Sanjeeva Srivastava,Aihua Sun,Siu Kwan Sze,Chao Tang,Liujun Tang,Ruijun Tian,Juan Antonio Vizcaíno,Chanjuan Wang,Chen Wang, Xiaowen Wang, Xinxing Wang,Yan Wang,Tobias Weiss,Mathias Wilhelm, Robert Winkler,Bernd Wollscheid,Limsoon Wong, Linhai Xie,Wei Xie,Tao Xu, Tianhao Xu,Liying Yan,Jing Yang,Xiao Yang,John Yates, Tao Yun,Qiwei Zhai,Bing Zhang,Hui Zhang,Lihua Zhang,Lingqiang Zhang, Pingwen Zhang,Yukui Zhang, Yu Zi Zheng,Qing Zhong,Yunping Zhu, π-HuB Consortium

Natureno. 8046 (2025): E22-E22

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Proteomic Diversity in Bacteria: Insights and Implications for Bacterial Identification

Miriam Abele,Armin Soleymaniniya,Florian P. Bayer, Nina Lomp,Etienne Doll,Chen Meng,Klaus Neuhaus,Siegfried Scherer,Mareike Wenning, Nina Wantia,Bernhard Kuster,Mathias Wilhelm,Christina Ludwig

Molecular & Cellular Proteomicspp.100917, (2025)

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Network Medicine-Based Epistasis Detection in Complex Diseases: Ready for Quantum Computing

Markus Hoffmann,Julian M. Poschenrieder,Massimiliano Incudini, Sylvie Baier,Amelie Fritz,Andreas Maier,Michael Hartung, Christian Hoffmann,Nico Trummer,Klaudia Adamowicz,Mario Picciani, Evelyn Scheibling,Maximilian Harl, Ingmar Lesch, Hunor Frey, Simon Kayser, Paul Wissenberg,Leon Schwartz, Leon Hafner, Aakriti Acharya, Lena Hackl,Gordon Grabert,Sung-Gwon Lee,Gyuhyeok Cho,Matthew E. Cloward,Jakub Jankowski,Hye Kyung Lee,Olga Tsoy,Nina Wenke,Anders Gorm Pedersen,Klaus Bonnelykke,Antonio Mandarino,Federico Melograna,Laura Schulz,Hector Climente-Gonzalez,Mathias Wilhelm,Luigi Iapichino,Lars Wienbrandt,David Ellinghaus,Kristel Van Steen,Michele Grossi,Priscilla A. Furth,Lothar Hennighausen,Alessandra Di Pierro,Jan Baumbach,Tim Kacprowski,Markus List,David B. Blumenthal

NUCLEIC ACIDS RESEARCHno. 17 (2024): 10144-10160

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The Good, the Bad, and the Ugly: Drug Response Prediction Using Machine Learning

Mario Picciani,Judith Bernett,Markus List,Mathias Wilhelm

The good, the bad, and the ugly Drug response prediction using machine learning (2024)

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PROSPECT PTMs: Rich Labeled Tandem Mass Spectrometry Dataset of Modified Peptides for Machine Learning in Proteomics

Wassim Gabriel, Omar Shouman, Eva Ayla Schröder, Florian Bößl,Mathias Wilhelm

Conference on Neural Information Processing Systems (2024)

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Koina: Democratizing Machine Learning for Proteomics Research

Ludwig Lautenbacher,Kevin L Yang,Tobias Kockmann,Christian Panse,Matthew Chambers, Elias Kahl,Fengchao Yu,Wassim Gabriel, Dulguun Bold,Tobias Schmidt,Kai Li,Brendan MacLean,Alexey I Nesvizhskii,Mathias Wilhelm

bioRxiv the preprint server for biology (2024)

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IS-PRM-based Peptide Targeting Informed by Long-Read Sequencing for Alternative Proteome Detection

Jennifer A. Korchak,Erin D. Jeffery, Saikat Bandyopadhyay,Ben T. Jordan, Micah D. Lehe, Emily F. Watts,Aidan Fenix,Mathias Wilhelm,Gloria M. Sheynkman

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRYno. 11 (2024): 2614-2630

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Prosit-XL: Enhanced Cross-Linked Peptide Identification by Accurate Fragment Intensity Prediction to Study Protein-Protein Interactions and Protein Structures

Mostafa Kalhor, Cemil Can Saylan,Mario Picciani, Lutz Fischer, Falk Schimweg, Joel Lapin,Juri Rappsilber,Mathias Wilhelm

biorxiv（2024）

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